During the 2023–24 academic year, the CMSA will be hosting a seminar on Active Matter, organized by Farzan Vafa. This seminar will take place bi-weekly on Mondays at 12:30 – 1:30 pm (Eastern Time). The meetings will take place in Room G02 at the CMSA, 20 Garden Street, Cambridge MA 02138, and some meetings will take place virtually on Zoom or be held in hybrid formats.
To learn how to attend, please fill out this form, or contact Farzan Vafa (fvafa@cmsa.fas.harvard.edu).
The schedule will be updated as talks are confirmed.
Abstract: I will begin by introducing an emerging paradigm of cellular organization – the dynamic compartmentalization of biochemical pathways and molecules by phase separation into distinct and multi-phase condensates. Motivated by this, I will discuss two largely orthogonal problems, united by the theme of phase separation in multi-component and chemically active fluid mixtures. 1. I will […]
Abstract: Life is a nonequilibrium phenomenon. Metabolism provides a continuous flux of energy that dictates the form and function of many subcellular structures. These subcellular structures are active materials, composed of molecules which use chemical energy to perform mechanical work and locally violate detailed balance. One of the most dramatic examples of such a self-organizing […]
Abstract: Interacting particle models are often employed to gain understanding of the emergence of macroscopic phenomena from microscopic laws of nature. These individual-based models capture fine details, including randomness and discreteness of individuals, that are not considered in continuum models such as partial differential equations (PDE) and integral-differential equations. The challenge is how to simultaneously […]
Abstract: During development, organisms interact with their natural habitats while undergoing morphological changes, yet we know little about how the interplay between developing systems and their environments impacts animal morphogenesis. Cnidaria, a basal animal lineage that includes sea anemones, corals, hydras, and jellyfish, offers unique insight into the development and evolution of morphological complexity. In my […]
Abstract: Active crystals are highly ordered structures that emerge from the nonequilibrium self-organization of motile objects, and have been widely studied in synthetic and bacterial active matter. In this talk, I will describe how swimming sea star embryos spontaneously assemble into chiral crystals that span thousands of spinning organisms and persist for tens of hours. Combining […]
Abstract: In this talk I will review our ongoing theoretical and experimental efforts toward deciphering the hydrodynamic behavior of confluent epithelia. The ability of epithelial cells to collectively flow lies at the heart of a myriad of processes that are instrumental for life, such as embryonic morphogenesis and wound healing, but also of life-threatening conditions, such […]
Abstract: Fluids pervade complex systems, ranging from fish schools, to bacterial colonies and nanoparticles in drug delivery. Despite its importance, little is known about the role of fluid mechanics in such applications. Is schooling the result of vortex dynamics synthesized by individual fish wakes or the result of behavioral traits? Is fish schooling energetically favorable? I […]
Abstract: My lab is interested in the active and adaptive materials that underlie control of cell shape. This has centered around understanding force transmission and sensing within the actin cytoskeleton. I will first review our current understanding of the types of active matter that can be constructed by actin polymers. I will then turn to our […]
Abstract: The spontaneous emergence of collective flows is a generic property of active fluids and often leads to chaotic flow patterns characterized by swirls, jets, and topological disclinations in their orientation field. I will first discuss two examples of these collective features helping us understand biological processes: (i) to explain the tortoise & hare story in bacterial competition: […]
Abstract: The developmental cycle of Myxococcus xanthus involves the coordination of many hundreds of thousands of cells aggregating to form mounds known as fruiting bodies. This aggregation process begins with the sequential formation of more and more cell layers. Using three-dimensional confocal imaging we study this layer formation process by observing the formation of holes […]
Abstract: The morphogenesis of branched tissues has been a subject of long-standing debate. Although much is known about the molecular pathways that control cell fate decisions, it remains unclear how macroscopic features of branched organs, including their size, network topology and spatial pattern are encoded. Based on large-scale reconstructions of the mouse mammary gland and […]
Speaker: Guillaume Duclos (Brandeis) Title: Building active nematic and active polar liquids out of biological machines Abstract: Active matter describes out-of-equilibrium materials composed of motile building blocks that convert free energy into mechanical work. The continuous input of energy at the particle scale liberates these systems from the constraints of thermodynamic equilibrium, leading to emergent collective behaviors not found in passive materials. In this talk, I […]